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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs141288404 chr6:87106590 G/T CT47A1 chrX:120116330-120119642:- 0.23 5.96 5.85E-9 Box Plot
BLCA rs141424597 chr5:99619344 C/G CT47A9 chrX:120077415-120080737:- 0.23 7.03 9.63E-12 Box Plot
BLCA rs141479605 chr11:131913742 T/C SNX11 chr17:46180719-46200436:+ 0.83 6.3 8.14E-10 Box Plot
BLCA rs141545226 chr22:23969255 ATTTT/A IGLL3 chr22:25713888-25716191:+ 0.37 6.7 7.5E-11 Box Plot
BLCA rs141783865 chr17:44755729 A/C LOC644172 chr17:43677491-43679748:- 1.16 17.88 2.09E-52 Box Plot
BLCA rs141783865 chr17:44755729 A/C LRRC37A4 chr17:43578685-43595516:- -0.6 -10.45 1.14E-22 Box Plot
BLCA rs141783865 chr17:44755729 A/C MGC57346 chr17:43697712-43715327:+ 0.5 6.97 1.38E-11 Box Plot
BLCA rs1419183 chr6:28242794 A/C BTN3A2 chr6:26365387-26378548:+ -0.38 -6.06 3.17E-9 Box Plot
BLCA rs142090164 chr5:38862708 C/T CT47A9 chrX:120077415-120080737:- 0.23 6.74 5.71E-11 Box Plot
BLCA rs142167 chr17:44795234 C/T LOC644172 chr17:43677491-43679748:- -0.78 -12.26 2.22E-29 Box Plot
BLCA rs142167 chr17:44795234 C/T LRRC37A4 chr17:43578685-43595516:- 0.42 8.07 8.97E-15 Box Plot
BLCA rs142376034 chr1:58933606 TG/T HTN3 chr4:70894130-70902255:+ 0.35 5.97 5.32E-9 Box Plot
BLCA rs142808087 chr6:28326294 GCAGAACCCA/G ZFP57 chr6:29640169-29648887:- 0.78 6.97 1.35E-11 Box Plot
BLCA rs142952665 chr3:129992520 GT/G GRXCR1 chr4:42895284-43032675:+ 0.3 6.62 1.22E-10 Box Plot
BLCA rs142965311 chr6:27989252 C/T ZFP57 chr6:29640169-29648887:- 0.71 6.63 1.16E-10 Box Plot